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PopGenome 2.1.5

4/26/2015

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New PopGenome on CRAN
Changes in PopGenome 2.1.5
===========================
BUG FIXED:
- readData(,format="VCF") didn't handle insertions.
  Those positions are now treated as unknowns
- MS() failed for low theta values  
- minor issue in set.synnonsyn()
NEW FEATURES:
- region.as.fasta(,type=2) now uses the information
  stored in the slot GENOME.class.split@region.names
  to extract the FASTA.
- VCF_split_into_scaffolds()
- GFF_split_into_scaffolds()
- count.unknowns()
- new manual on CRAN
- split_data_into_GFF_attributes()
- get.feature.names()
THX:
- Mara
- Tina
- Tony


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    Author

    Bastian Pfeifer

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